Molecular Basis Of Mutation: Mutation, Repair and Recombination

Molecular Basis Of Mutation: Mutation, Repair and Recombination

Irshad AnwarUpdated on 05 Feb 2026, 08:11 PM IST

The Molecular Basis of Mutation explains changes in the DNA sequence. These mutations alter gene function and drive genetic variation. In Mutation NEET Biology, the molecular basis of mutation is linked to DNA replication errors, tautomeric shifts in DNA or exposure to external mutagens. There are types of mutations, like spontaneous mutations and induced mutations. Spontaneous mutations occur due to the DNA polymerase errors or tautomeric transitions. Induced mutations happen when DNA is exposed to an external mutagen, such as UV radiation, which induces thymine dimers and alkylating agents.

This Story also Contains

  1. Molecular Basis of Mutation in NEET Biology
  2. Definition of Gene Mutation with Example
  3. Types of Mutations
  4. Spontaneous Mutations vs Induced Mutations
  5. Mutation NEET MCQs (With Answers & Explanations)
  6. Recommended Video on Molecular Basis of Mutation
Molecular Basis Of Mutation: Mutation, Repair and Recombination
Molecular Basis Of Mutation

Errors in the mutation mechanism in replication of DNA or mutagens exposure lead to point mutation, transition, transversion, and frameshift mutations. A gene mutation definition includes permanent changes such as substitution, insertion, deletion, and frameshift mutation. These mutations cause protein sequence alteration and may result in frameshift mutation consequences. The molecular basis of mutation is vital in Mutation NEET Biology notes, covering spontaneous mutations vs induced mutations, DNA replication errors, tautomeric shifts in DNA, and mutagens like UV radiation, thymine dimers, and alkylating agents.

Molecular Basis of Mutation in NEET Biology

The molecular basis of mutation is changes in the nucleotide sequence of DNA that alters of the genetic information it carries. These can be caused by spontaneous errors during DNA replication, by chemicals, radiation, and also by viruses. The results of mutations can be innocuous or injurious and can moreover influence the attributes of an organism, thus attaining genetic diversity in populations or genetic disorders.

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Definition of Gene Mutation with Example

A gene mutation is a permanent alteration within the DNA sequence that makes up the gene. Such mutations can happen in several ways, such as substitutions, insertions, deletions, and frameshift mutations. These changes can perturb gene function in a way that the expression of either a nonfunctional gene occurs or its production. Gene mutations are either inherited or acquired during an organism's lifetime and may make important contributions to a variety of diseases and evolutionary processes.

Types of Mutations

Mutations can be classified according to the nature of the change in the DNA sequence. All 4 types of mutation, along with their comparison, are discussed below in the table:

Feature

Substitution (Transition & Transversion)

Insertion

Deletion

Frameshift Mutation

Definition

Another replaces one nucleotide

One or more nucleotides are added

One or more nucleotides are removed

Shifts the reading frame due to the insertion or deletion of nucleotides

Sub-types

Transition (purine↔purine, pyrimidine↔pyrimidine); Transversion (purine↔pyrimidine)

Not applicable

Not applicable

Not applicable

Effect on Reading Frame

No

Yes, if insertion is not in multiples of 3

Yes, if deletion is not in multiples of 3

Yes

Impact on Protein Sequence

May be silent (no change), missense (amino acid change), or nonsense (stop codon)

Alters the amino acid sequence and can introduce a frameshift

Alters the amino acid sequence and can introduce a frameshift

Alters the entire downstream amino acid sequence

Possibility of Frameshift

No

Yes, if not in multiples of 3

Yes, if not in multiples of 3

Always

Functional Consequences

Protein may be normal, altered, or truncated

Protein may be non-functional or gain a novel function

May lead to loss of essential protein function

Usually results in non-functional or harmful proteins

Severity of Effect

Mild to severe, depending on position and type

Often severe if it causes a frameshift

Often severe if it causes a frameshift

Usually severe due to a major change in protein structure

Example

Sickle Cell Anaemia (missense mutation in β-globin gene)

Tay-Sachs disease (insertion in the HEXA gene)

Cystic Fibrosis (3-base pair deletion in the CFTR gene)

Huntington’s disease (triplet repeat expansion leads to a frameshift in the coding region)

Spontaneous Mutations vs Induced Mutations

Mutations can be due to a variety of sources and can be broadly categorised into spontaneous and induced mutations. A basic comparison between spontaneous mutations and induced mutations is discussed below:

Feature

Spontaneous Mutations

Induced Mutations

Definition

Mutations that occur naturally without any external influence

Mutations that occur due to exposure to external physical, chemical, or biological agents (mutagens)

Major Cause

Internal cellular processes (e.g., DNA replication errors, spontaneous base changes)

Environmental mutagens such as chemicals, radiation, or biological agents

Sub-types

1. Errors during DNA replication

2. Tautomeric shifts

1. Chemical mutagens

2. Physical mutagens

3. Biological agents

Mechanism

  • DNA polymerase misincorporates bases

  • Base tautomerism leads to incorrect base pairing

  • Mutagens alter base structure or cause strand damage

  • Foreign DNA integration alters gene function

Example of Mechanism

  • Tautomeric shift: Adenine pairs with cytosine instead of thymine

  • DNA replication errors cause point mutations

  • Base analogues: mimic real bases and get incorporated

  • UV radiation causes thymine dimers

  • Viruses: cause gene disruption

Type of Mutation Caused

Often point mutations (e.g., transition or transversion)

Can cause point mutations, insertions, deletions, frameshifts, or chromosomal aberrations

Repair Possibility

May be repaired by proofreading or mismatch repair systems

It may overwhelm repair systems, depending on the dose or intensity of the mutagen

Examples

  • Spontaneous base deamination

  • Tautomeric base pairing

  • UV radiation (thymine dimers)

  • Alkylating agents

  • Retrovirus integration

Significance

Source of natural genetic variation

Used in experimental mutagenesis and linked to mutagen-induced diseases (e.g., cancer)

Mutation NEET MCQs (With Answers & Explanations)

Important questions asked in NEET from this topic are:

  • Classification and types of mutations

  • Causes and effects of mutations

Practice Questions for NEET

Question: What is not true for genetic code?

  1. It is nearly universal

  2. It is degenerate

  3. It is unambiguous

  4. A codon in mRNA is read in a non-contiguous fashion

Correct Answer: 4) A codon in mRNA is read in a non-contiguous fashion

Explanation:

DNA or mRNA sequences and amino acid sequences are connected through the genetic code, where each triplet of nucleotides, called a codon, encodes one of the 20 amino acids (e.g., glutamic acid, methionine, phenylalanine, serine, tryptophan, tyrosine, etc.). There are 64 codons in total, and the genetic code is read in a continuous and non-overlapping manner. The statement that codons are read in a "non-contiguous manner" is false, as codons are read sequentially without any spaces or interruptions between them. This continuous reading ensures that each codon is translated directly into an amino acid without any punctuation or gaps.

Hence, the correct answer is option 4) A codon in mRNA is read in a non-contiguous fashion

Question: A Transition or transversion mutation could result due to

  1. Base pair mutation

  2. Silent mutation

  3. Nonsense mutation

  4. Missense mutation

Correct Answer: 1) Base pair mutation

Explanation:

Mutations are changes in the DNA sequence that can affect gene expression and function. In addition to base-pair substitutions, mutations include insertion (addition of one or more nucleotides) and deletion (removal of nucleotides), which can cause frameshifts. Mutations can also be classified as silent, missense, or nonsense based on their impact on protein synthesis. These changes are significant in evolution, genetic disorders, and the understanding of cellular processes. Base-pair substitution is of two types:

  • Transition mutation: When one purine is replaced by another purine or one pyrimidine is replaced by another pyrimidine.

  • Transversion mutation: When one purine is replaced by a pyrimidine and vice versa.

Hence, the correct answer is option (1) Base pair mutation. .

Question: Which of the following is a type of gene mutation

  1. Deletion

  2. Addition

  3. Substitution

  4. All of these

Correct Answer: 4) All of them

Explanation:

Type of gene mutation:

  • Deletion: This is a type of mutation where one or more nucleotide bases are removed from the DNA sequence.

  • Addition: This is when one or more nucleotide bases are added to the DNA sequence.

  • Substitution: This occurs when one nucleotide base is replaced by another in the DNA sequence.

Hence, the correct answer is option 4)All of these

Also Read:

Recommended Video on Molecular Basis of Mutation

Frequently Asked Questions (FAQs)

Q: What is the molecular basis of mutation in NEET biology?
A:

The molecular basis of mutation in NEET Biology involves permanent DNA sequence changes caused by replication errors, tautomeric shifts, or mutagens like UV radiation, thymine dimers, and alkylating agents. These lead to point, substitution, insertion, deletion, and frameshift mutations, driving genetic variation or disorders.

Q: What is difference between spontaneous and induced mutations?
A:

Spontaneous mutations arise internally due to replication errors, while induced mutations result from external mutagens like radiation or chemicals.

Q: Give examples of gene mutations in humans.
A:

Examples of gene mutations in humans include: 

  • Sickle Cell Anaemia: caused by a missense mutation in the β‑globin gene. 
  • Cystic Fibrosis: due to a deletion mutation in the CFTR gene. 
  • Tay‑Sachs Disease: insertion mutation in the HEXA gene. 
  • Huntington’s Disease: triplet repeat expansion leading to frameshift effects.
Q: What are mutation types and their impact on protein function?
A:

Mutations are changes in the DNA sequence that can alter protein function. Point mutations may be silent, missense, or nonsense, while insertions and deletions can cause frameshifts. Frameshift mutations usually disrupt the entire downstream sequence, often producing non‑functional or harmful proteins.

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