Hello aspirant

Yes.. the Theory and practical both marks will be considered for the eligibility criteria of NEET, AIIMS or JIPMER.

Both the marks and its aggregate are important for the final calculation.

I hope I cleared your doubt.

All the best

Your +2 Aggregate Mark in Physics, Chemistry and Biology is taken into account. Aggregate marks would include Theory plus Practical. Getting 50 percent below in Practicals is merely impossible and a rare event. Total sum (Theory and Practicals) is taken into account and not the individual mark.
Aggregate mark should be
For General - 50 percent or more
For OBC/SC/ST - 40 percent or more
For General Physically Handicapped Category - 45 percent or more

For OBC/SC/ST Physically Handicapped Category - 40 percent or more

Thank You.
Best of Luck.