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Hello,
You can definitely choose biotechnology in your Masters if you are really passionate about it. M.Sc. in Biotechnology is provided by many prestigious institutes like IITs, RCB (Regional Centre for Biotechnology) and other institutes as well. With Masters you may get into research or you may choose careers in any industries.
Now-a-days more patents are generated from this field. You have lot of opportunities in agricultural field, fermentation industry, food industry, pharmaceuticals, designing and inventing diagnostic tools, proteomics, bioinformatics etc.
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