See while you are applying for the Assistant Professor post, then the main thing that will be accounted your aptitude through the examination you give (College Service Commission/any examination for the post of Asst. Professor) & based on that only you will be called for Interview. Now in Interview, if one has good knowledge then all those marks & other things don't matter. What matters is the thesis & the knowledge the candidate have.

Now if the candidate is not upto the mark but if he/she have a good marks in PhD or in NET then sometimes the Interviewing Board can give some preference.

I hope this answer provides you some insight. Wish you a great day!