Hey

There are various government colleges which provide the course for Masters in Physiotherapy. I am providing the list for the same-

CMC Vellore

M.S Ramiah Medical college, Bangalore

Sri Ramachandra University, Channai

Maharashtra University of Health Sciences, Nasik

Baba Farid University of Health Sciences, Faridkot

Manipal University, Manipal

NIMS University, Jaipur

Datta Meghe Institute of Medical Sciences, Wardha

You can pursue the course in any of these colleges by qualifying the NEET PG examination. 

I hope this helps. All the best!!