Top colleges offering aeronautical engg are -
IIT bombay , kgp , kanpur , madras. But these are onyl through JEE advanced .
Other colleges are ANNA university , manipal institute of technology , SRM chennai .
Do look for your interests .

Here are some of the colleges name you can prefer for the same.

Indian Institute of Technology, Bombay
PEC University of Technology
Manipal Institute of Technology (MIT Manipal)
Jawaharlal Nehru Technological University Kakinada

I am sharing a list of colleges for aeronautical engineering in India.
Aeronautical Engineering Colleges

You can choose the required filters as per your requirement like location etc.
Good Luck.