I will definitely say VIT Vellore will be better for BTech CSE branch rather than Integrated MTech in VIT BHOPAL because:

• VIT Vellore has better placement and infrastructure.
• Most companies prefers BTech over MTech because the industrial sector feel lacky while having specialization. Also you can observe the data, then you would see that MTech get lesser salary package than BTech in every institute.

Subject wise or curriculum Integrated MTech isn't bad but it is the course only if you are interested in it and not as you are getting chance in it.

To know more about VIT BHOPAL visit the link below:

https://www.careers360.com/university/vit-university-bhopal

To know more about VIT VELLORE visit the link below:

https://www.careers360.com/university/vellore-institute-of-technology-vellore

I hope this answer helps.