Hello,
No, you don't need to appear in GATE to do M.Sc in microbiology because
Most of the institutions have entrance exams as admission mode.
The top colleges offering M.Sc. Microbiology are:
St. Xaviers College Mumbai
University of Lucknow
The Oxford College of Science Bangalore
Fergusson College Pune
St. Xaviers College Kolkata
Barkatullah University, Bhopal
I hope this helps.

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