CSE: Indian Institute of Technology Palakkad, Indian Institute of Technology Tirupati, Indian Institute of Technology Dharwad, Indian Institute of Technology Bhilai, Indian Institute of Technology Goa.

ECE: Indian Institute of Technology BhilaiIndian Institute of Technology Bhubaneswar, Indian Institute of Technology (ISM) Dhanbad

Bio-technology: IIT Guwahati, IIT Roorkee

Mechnical: Indian Institute of Technology Ropar, Indian Institute of Technology Patna, Indian Institute of Technology Bhubaneswar, Indian Institute of Technology Indore, Indian Institute of Technology (BHU) Varanasi  (May be), Indian Institute of Technology Goa, Indian Institute of Technology Mandi, Indian Institute of Technology Gandhinagar(Maybe) ,  Indian Institute of Technology (ISM) Dhanbad.

These are the IIT's in 2017 at this rank these branches seat was over. For more info you can refer this link: https://engineering.careers360.com/articles/iits-cutoff-for-top-btech-branches
Hope this will help! All the best.