Hello Dear,

No I don't think it will create any problem.The basic difference between these centers are The Bangalore campus is old and has the alumni based and Bangalore as a location is hub for IT and start ups. If we talk about NMIMS Navi Mumbai being close to Mumbai, most of the faculties are similar to that of main campus. This campus will be known as a global campus. So considering these facts NMIMS Navi Mumbai is a decent choice.

Good Luck