Hello.
Yes there are some ideas which offers you MSc in microbiology course so the list of these IIT is given below:

• IIT Bombay.
• IIT Roorkee.
• IIT Delhi.
• IIT  Guwahati.
• IIT Kanpur.
• IIT  Kharagpur.
• IIT Madras.

as IIT's offers you this course so I think you don't need to know about more government colleges because these are the top most among other ones.
Best of luck.

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