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Quick Facts

Medium Of InstructionsMode Of LearningMode Of Delivery
EnglishSelf StudyVideo and Text Based

Courses and Certificate Fees

Fees InformationsCertificate AvailabilityCertificate Providing Authority
INR 11354yesUC San Diego

The Syllabus

  •  2011 European E. coli Outbreak
  • Programming Assignments
  • Programming Challenge 1-1: Assembling the phi X174 Genome from Error-Free Reads Using Overlap Graphs
  • Programming Challenge 1-2: Assembling the phi X174 Genome from Error-Prone Reads Using Overlap Graphs

  • Assembling Genomes Using de Bruijn Graphs
  • Programming Assignment 2-1: Puzzle Assembly
  • Programming Assignment 2-2: Eulerian Cycle
  • Programming Assignment 2-3: Universal String
  • Programming Assignment 2-4: Assembling the phi X174 Genome from its k-mer Composition

  • Genome Assembly Faces Real Sequencing Data
  • Programming Challenge 3-1: Circulation
  • Programming Challenge 3-2: Selecting the Optimal k-mer Size
  • Programming Challenge 3-3: Bubble Detection
  • Programming Challenge 3-4: Tip Removal
  • Programming Challenge 3-5: Assembling the phi X174 Genome from Error-Prone Reads using de Bruijn Graphs
  • Programming Challenge 3-6: Final Project: Implementing an Assembler

  • Preparing for the Final Exam
  • Practice Exam
  • Final Exam

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