On FAQ jee main official site of NTA its written if candidate choose both paper its treated as ONE!! and also in NEWS amarujala
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Rahul that means that totally you have 3 attempts to write the JEE MAINS examination in which in one attempt you are going to get two chances to write the paper i.e in the month of January and April. So the NTA is displaying you that your best score among both these two chances i.e in January and in April will be considered for the admission process or counselling for the colleges via JEE Mains.
All the best

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